PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-06
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23781719
SRA accession
bff40eb8-2553-4854-947b-6f03d7fbc5a4
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-06-15
collection date
97.44
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
2.14
%
contamination score
660
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
rock
habitat
adult
host life stage
Phakellia robusta
host scientific name
not applicable
host sex
2738514
host taxid
PILAR RÌOS
identified_by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Phakellia robusta
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
46
number of standard tRNAs extracted
Candidatus Poriferisodalaceae bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
beneficial
relationship
SAMEA117795511
sample derived from
Candidatus Poriferisodalaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000306
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
bff40eb8-2553-4854-947b-6f03d7fbc5a4-asg-bin.3
title
odPhaRobu1.Poriferisodalaceae_1
tolid