PROKKA (version 1.14.6)
16S recovery software
No
16s recovered
2025-03-06
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23781711
SRA accession
1c16fe17-8bf2-4274-98cf-c648250c31d9
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-06-15
collection date
43.89
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
660
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
rock
habitat
adult
host life stage
Phakellia robusta
host scientific name
not applicable
host sex
2738514
host taxid
PILAR RÌOS
identified_by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Phakellia robusta
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
5
number of standard tRNAs extracted
Longimicrobiales bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
beneficial
relationship
SAMEA117795511
sample derived from
Longimicrobiales bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000306
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
1c16fe17-8bf2-4274-98cf-c648250c31d9-asg-bin.76
title
odPhaRobu1.Longimicrobiales_1
tolid