PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-10
ENA first public
ERC000050
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23791433
SRA accession
eeafc55e-f6fc-43c8-a95f-5a402e6a5d16
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF DERBY
barcoding center
hic-mapping
binning parameters
bin3C (version 0.3.3); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
Kate Quigley
collected_by
Australian Institute of Marine Science
collecting institution
2021-11-15
collection date
15.44
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
1
m
depth
adult coral tissue
environmental medium
Australia
geographic location (country and/or sea)
-14.77
DD
geographic location (latitude)
145.37
DD
geographic location (longitude)
Martin
geographic location (region and locality)
Lagoon
habitat
adult
host life stage
Porites lutea
host scientific name
not provided
host sex
51062
host taxid
Kate Quigley, Sam Noonan
identified_by
Australian Insitute of Marine Science
identifier_affiliation
metagenome-assembled genome
investigation type
Coral: Porites lutea
isolation_source
marine benthic biome
local environmental context
coral metagenome
metagenomic source
30
number of standard tRNAs extracted
Gloeomargaritales cyanobacterium
organism
WHOLE ORGANISM
organism part
2021-11-15
original collection date
Australia | Martin
original collection location
ASG
project name
SAMEA117801810
sample derived from
Gloeomargaritales cyanobacterium
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000322
specimen_id
NA
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
eeafc55e-f6fc-43c8-a95f-5a402e6a5d16-asg-CL039
title
jaPorLute2.Gloeomargaritales_cyanobacterium_1
tolid