PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-12
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23804943
SRA accession
7d8b8fe6-3389-4070-a091-d9a8b8500587
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
DASTOOL (version 1.1.5); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Yu-Jing Chiou
collected_by
University of New South Wales
collecting institution
2024-02-29
collection date
92.86
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.84
%
contamination score
10
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
-33.99
DD
geographic location (latitude)
151.23
DD
geographic location (longitude)
New South Wales | Bare Island | Sydney
geographic location (region and locality)
Coastal rocky reef
habitat
adult
host life stage
Scopalina australiensis
host scientific name
not collected
host sex
3128397
host taxid
Torsten Thomas
identified_by
University of New South Wales
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Scopalina australiensis
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
45
number of standard tRNAs extracted
Thermodesulfobacteriota bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA117815270
sample derived from
Thermodesulfobacteriota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000329
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
7d8b8fe6-3389-4070-a091-d9a8b8500587-asg-bin.257
title
odScoAust1.Thermodesulfobacteriota_1
tolid