PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-12
ENA first public
ERC000050
ENA-CHECKLIST
University of British Columbia
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23804898
SRA accession
f42ada63-a3e2-492e-b57b-c9f76820826c
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF BRITISH COLUMBIA
barcoding center
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
TINGTING XIANG | ANDREA KIRK
collected_by
University of North Carolina at Charlotte
collecting institution
2022-05-31
collection date
82.39
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
3.15
%
contamination score
3-20
m
depth
ciliate culture
environmental medium
USA
geographic location (country and/or sea)
13.42
DD
geographic location (latitude)
144.66
DD
geographic location (longitude)
UNC CHARLOTTE
geographic location (region and locality)
on Padina spp. (Phaeophyta) in tropical waters
habitat
vegetative cell
host life stage
Maristentor dinoferus
host scientific name
not applicable
host sex
244810
host taxid
TIGTING XIANG | ANDREA KIRK
identified_by
UNC CHARLOTTE
identifier_affiliation
metagenome-assembled genome
investigation type
Ciliate: Maristentor dinoferus
isolation_source
marine biome
local environmental context
ciliate metagenome
metagenomic source
40
number of standard tRNAs extracted
Gammaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
2022-05-27
original collection date
USA | Guam
original collection location
ASG
project name
Selected with pipettor from seawater
sample collection method
SAMEA117815236
sample derived from
Gammaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
UOBC0000020
specimen_id
NOT_PROVIDED
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
f42ada63-a3e2-492e-b57b-c9f76820826c-asg-MAGScoT_cleanbin_000015
title
piMarDino1.Gammaproteobacteria_4
tolid