PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-17
ENA first public
ERC000047
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23819536
SRA accession
eb1091dc-daf2-4aeb-812c-2eaa76c9e045
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF DERBY
barcoding center
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Kate Quigley
collected_by
Australian Institute of Marine Science
collecting institution
2020-11-10
collection date
96.44
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
4.4
%
contamination score
5
m
depth
dinoflagellate culture
environmental medium
Australia
geographic location (country and/or sea)
-14.34
DD
geographic location (latitude)
145.27
DD
geographic location (longitude)
TopJewell
geographic location (region and locality)
NA
habitat
not applicable
host life stage
Symbiodinium sp. 221 229
host scientific name
not applicable
host sex
2885082
host taxid
Kate Quigley, Sam Noonan
identified_by
Australian Insitute of Marine Science
identifier_affiliation
metagenome-assembled genome
investigation type
Dinoflagellate: Symbiodinium sp. 221 229
isolation_source
marine biome
local environmental context
dinoflagellate metagenome
metagenomic source
46
number of standard tRNAs extracted
Candidatus Poribacteria bacterium
organism
WHOLE ORGANISM
organism part
2020-11-10
original collection date
Australia | TopJewell
original collection location
ASG
project name
SAMEA117829808
sample derived from
Candidatus Poribacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000236
specimen_id
NA
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
eb1091dc-daf2-4aeb-812c-2eaa76c9e045-asg-MAGScoT_cleanbin_000010
title
pySymSpeb4.Poribacteria_1
tolid