PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2025-03-23
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23842223
SRA accession
6a031244-5366-4265-a267-c5bbaa012a93
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Yu-Jing Chiou
collected_by
University of New South Wales
collecting institution
2024-03-01
collection date
70.28
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
5.3
%
contamination score
10
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
-33.99
DD
geographic location (latitude)
151.23
DD
geographic location (longitude)
New South Wales | Bare Island | Sydney
geographic location (region and locality)
Coastal rocky reef
habitat
adult
host life stage
Haplosclerida sp. GHC0000330
host scientific name
not collected
host sex
3378732
host taxid
Torsten Thomas
identified_by
University of New South Wales
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Haplosclerida sp. GHC0000330
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
34
number of standard tRNAs extracted
Thermodesulfobacteriota bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117852523
sample derived from
Thermodesulfobacteriota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000330
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
6a031244-5366-4265-a267-c5bbaa012a93-asg-MAGScoT_cleanbin_000058
title
ooOscZora1.Thermodesulfobacteriota_1
tolid