SAMN46113600
External Id
Iowa State University
INSDC center name
2025-03-28T00:00:00Z
INSDC first public
2025-03-28T12:17:03.708Z
INSDC last update
live
INSDC status
MIMAG.water
NCBI submission model
MIMAG.water.6.0
NCBI submission package
bin.236
bin_number
2023-08-08
collection_date
2, 3.5, 5.75, and 7 meters
depth
SRR30676215,SRR30676216,SRR30676217,SRR30676218,SRR30676219,SRR30676220,SRR30676221,SRR30676222
derived_from
MAG was assembled using metaSPAdes with all sequencing samples (Deming A-H in this BioProject) pooled as input. Metabat was used for binning, checkM for quality checking, and dRep for dereplicating and removing low-quality bins.
description
ENVO_00000021
env_broad_scale
ENVO_00000199, ENVO:06105011
env_local_scale
ENVO:04000007
env_medium
1
environmental-sample
USA: Deming Lake, Itasca, Minnesota
geo_loc_name
Deming_bin.236
isolate
Freshwater lake
isolation_source
47.1704 N 95.1681 W
lat_lon
freshwater metagenome
metagenome-source
1
metagenomic
Polynucleobacter sp.
http://purl.obolibrary.org/obo/NCBITaxon_2029855
organism
Water pump
samp_collect_device
Water was sent through consecutive 11 um, 3 um, and .22 um filters using a peristaltic pump
samp_mat_process
6 days
samp_store_dur
-80 C
samp_store_temp
metagenomic assembly
sample-type
metagenomic assembly
sample_type
MIMAG Metagenome-assembled Genome sample from Polynucleobacter sp.
title