SAMN46879238
External Id
UPM
INSDC center name
2025-03-28T12:42:44.053Z
INSDC first public
2025-03-28T12:42:44.053Z
INSDC last update
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
10
age
2022-04-01
collection_date
VAD2
cultivar
This assembly, spanning approximately 2.1 Gbp, was generated using state-of-the-art sequencing technologies, including Hi-C for chromosome conformation capture. It features scaffold and contig N50 values of 133.765 Mbp and 8.189 Mbp, respectively, with repetitive elements accounting for 81.45% of the genome. Gene annotation was performed using transcriptomic data from 19 tissues at different developmental stages, leading to the identification of 46,357 protein-coding genes, 99.70% of which were functionally characterized.
description
Spain: Centro Nacional de Recursos Geneticos Forestales Puerta de Hierro, Madrid
geo_loc_name
missing
isolation_source
missing
lat_lon
Ulmus minor
http://purl.obolibrary.org/obo/NCBITaxon_262084
organism
tissue sample
sample_type
hermaphrodite
sex
leaf
tissue
Genome assembly and annotation of a DED-resistant Ulmus minor genotype
title