2025-03-31
ENA first public
ERC000011
ENA-CHECKLIST
Dr. Modhumita Dasgupta, Mrs. Muneera Parveen A, ICFRE - Institute of Forest Genetics and Tree Breeding, Coimbatore, Tamil Nadu, Dr. Suma Arun Dev, Sharath Parammel, Dr. V.B. Sreekumar, Kerala Forest Research Institute, Peechi, Kerala
INSDC center name
public
INSDC status
ERS20837812
SRA accession
SAMIN0004890-Whole genome sequencing of Calamus brandisii - Female
Submitter Id
IBDC
broker name
2019-11-15
collection date
Genomic DNA was isolated from the leaflet of female plant using ArborEasy DNA isolation kit. DNA concentration and purity was estimated using NanoDrop ND-1000 UV-Vis Spectrophotometer and DNA was quantified using Qubit Fluorometer. Library construction was conducted using KAPA HyperPlus Kit to generate fragments of size of 300-500bp. The library was subsequently quantified using Qubit Fluorometer and size distribution was checked on Agilent 2100 Bioanalyzer. The library was sequenced on Illumina NovaSequsing 150 bp paired-end chemistry.
description
India
geographic location (country and/or sea)
8°37'26.46"N
geographic location (latitude)
77°14'42.28" E
geographic location (longitude)
Natural Forest
isolation and growth condition
Calamus brandisii
organism
Mature leaflet
plant developmental stage
Female
plant sex
Leaflet
plant structure
Calamus brandisii
scientific_name
Whole genome sequencing of Calamus brandisii - Female
title