2025-04-02
ENA first public
ERC000024
ENA-CHECKLIST
IOW Leibniz-Institut fur Ostseeforschung Warnemuende
INSDC center name
public
INSDC status
ERS23958747
SRA accession
182838:5029d317-867f-47ef-8dc3-679b6e5cb489
Submitter Id
GFBIO
broker name
missing: control sample
collection date
sequences were generated in mixed orientation, separate read files submitted for each orientation
                    (here: R1 file contains forward reads)
comment
Mock community sequenced as control for sequencing batch 17.
description
estuarine biome [ENVO:01000020]|brackish estuary [ENVO:00002137]|freshwater biome
                    [ENVO:00000873]
environment (biome)
microbial community [PCO:1000004]
environment (feature)
brackish water body [ENVO:01001321]|estuarine water [ENVO:01000301]|freshwater river
                    [ENVO:01000297]|microbial community [PCO:1000004]
environment (material)
water
environmental package
yes
environmental_sample
MockCommunity17_lib1
experiment_id
Germany
geographic location (country and/or sea)
missing: control sample
m
geographic location (depth)
missing: control sample
m
geographic location (elevation)
missing: control sample
DD
geographic location (latitude)
missing: control sample
DD
geographic location (longitude)
mimarks-survey
investigation type
DNA was extracted from the samples using the magMAX Wastewater Kit (cat. nr. A52606) according to
                    the protocol using the KingFisher Flex system after 10 sec of bead beating with silica beads.
nucleic acid extraction
synthetic metagenome
organism
OTC-Genomics
project name
The mock community sample was created by mixing samples representative of the sampling area and
                    the first quarter of the sampling period to be used for all sequencing runs.
sample material processing
Mock community sequenced as control for sequencing batch 17.
sample_description
synthetic metagenome
scientific_name
true
submitted to insdc
MockCommunity17
title
water
water environmental package