2025-04-04
ENA first public
ERC000024
ENA-CHECKLIST
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research
INSDC center name
public
INSDC status
ERS22361003
SRA accession
208485:997887e8-44d4-4455-ad04-e48cd0e8d143
Submitter Id
fjord [ENVO:00000039]
broad-scale environmental context
GFBIO
broker name
2023-02-07
collection date
NGAM14
cruise_station
30
m
depth
in situ fixed water sample from station SO296_61_06_PCTD_0017_3 (st NGAM14) collected at depth 30m (fraction >0.2 micrometer)
description
0
m
elevation
estuarine water [ENVO:01000301]
environmental medium
water
environmental package
yes
environmental_sample
Chile
geographic location (country and/or sea)
-51.9916
DD
geographic location (latitude)
-72.93267
DD
geographic location (longitude)
Patagonian fjord Golfo Almirante Montt
geographic location (region and locality)
metatranscriptome
investigation type
microbial community [PCO:1000004]
local environmental context
QIAGEN Rneasy Mini Kit (Cat. No.: 74104)
nucleic acid extraction
seawater metagenome
organism
SO296/2_61-6
pangea_event_label
MAPUCHE
project name
samples collected with pumpCTD, water was fixed in situ, 2.4 L of water filtered on 47 mm PVDF membrane, poresize 0.2 micrometer, filters were frozen at -80 degrees C until extraction
sample material processing
in situ fixed water sample from station SO296_61_06_PCTD_0017_3 (st NGAM14) collected at depth 30m (fraction >0.2 micrometer)
sample_description
seawater metagenome
scientific_name
Illumina NovaSeq 6000
sequencing method
true
submitted to insdc
R39
title
160
m
total depth of water column
water
water environmental package