2025-04-04
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS23861799
SRA accession
ZE-03apr19-113
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin
binning software
freshwater biome
broad-scale environmental context
2019-04-03
collection date
49.4
%
completeness score
CheckM
completeness software
2.63
%
contamination score
Allofontibacter oligotrophicus assembled from Lake Zurich, Switzerland
description
natural lake
environmental medium
Switzerland
geographic location (country and/or sea)
47.30514
DD
geographic location (latitude)
8.573528
DD
geographic location (longitude)
Lake Zurich
isolation_source
freshwater lake
local environmental context
lake water metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB35770
project name
ERS4065062
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
multi-marker approach
taxonomic identity marker
ZE-03apr19-113
title