2025-04-04
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS23861780
SRA accession
MsE-30jul19-LR-39
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin
binning software
freshwater biome
broad-scale environmental context
2019-07-30
collection date
91.57
%
completeness score
CheckM
completeness software
4.82
%
contamination score
Allofontibacter temperatus assembled from Lake Most, Czech Republic
description
post-mining lake
environmental medium
Czech Republic
geographic location (country and/or sea)
50.53669
DD
geographic location (latitude)
13.64517
DD
geographic location (longitude)
Lake Most
isolation_source
freshwater lake
local environmental context
lake water metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB35770
project name
ERS4065083
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
multi-marker approach
taxonomic identity marker
MsE-30jul19-LR-39
title