Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-07
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23978015
SRA accession
d35dcd27-d16d-42e0-851b-5eb192b49f69
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage
binning parameters
MaxBin (version 2.2.7); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-06-12
collection date
11.35
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.91
%
contamination score
695
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
rock
habitat
adult
host life stage
Phakellia hirondellei
host scientific name
not applicable
host sex
2737913
host taxid
PILAR RÌOS
identified_by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Phakellia hirondellei
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
16
number of standard tRNAs extracted
Nitrospirales bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
beneficial
relationship
SAMEA117984136
sample derived from
Nitrospirales bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000305
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
d35dcd27-d16d-42e0-851b-5eb192b49f69-asg-maxbin2.006
title
odPhaHiro1.Nitrospirales_1
tolid