Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-07
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23977924
SRA accession
f57c9ae1-278f-4256-a6ee-d8fbf7c6a567
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
LUCIA PITA
collected_by
GEOMAR
collecting institution
2020-12-15
collection date
80.91
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.54
%
contamination score
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
2
m
geographic location (depth)
54.42
DD
geographic location (latitude)
10.18
DD
geographic location (longitude)
GEOMAR Kiel
geographic location (region and locality)
rocky shore﻿
habitat
adult
host life stage
Halichondria panicea
host scientific name
not applicable
host sex
6063
host taxid
LUCIA PITA
identified_by
GEOMAR
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Halichondria panicea
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
29
number of standard tRNAs extracted
Luminiphilus sp.
organism
WHOLE ORGANISM
organism part
ASG
project name
unknown
relationship
SAMEA117984043
sample derived from
Luminiphilus sp.
scientific_name
Pacbio Sequel II
sequencing method
GHC0000043
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
f57c9ae1-278f-4256-a6ee-d8fbf7c6a567-asg-MAGScoT_cleanbin_000005
title
odHalPani1.Luminiphilus_sp_1
tolid