Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-07
ENA first public
ERC000050
ENA-CHECKLIST
Nova Southeastern University
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23978008
SRA accession
94e93ccd-9310-4b3b-8cf0-8dcf862fec05
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
ANTHONY BELLANTUONO
collected_by
FLORIDA INTERNATIONAL UNIVERSITY
collecting institution
2020-10-04
collection date
87.29
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
2.49
%
contamination score
KB8 or CCMP2464
culture_or_strain_id
1.0-2.0
m
depth
adult jellyfish tissue
environmental medium
USA
geographic location (country and/or sea)
25.10
DD
geographic location (latitude)
-80.44
DD
geographic location (longitude)
Florida | Florida Keys | Key Largo
geographic location (region and locality)
sandy bottom, high light
habitat
adult
host life stage
Cassiopea xamachana
host scientific name
male
host sex
12993
host taxid
ANTHONY BELLANTUONO
identified_by
FLORIDA INTERNATIONAL UNIVERSITY
identifier_affiliation
metagenome-assembled genome
investigation type
Jellyfish: Cassiopea xamachana
isolation_source
marine biome
local environmental context
jellyfish metagenome
metagenomic source
66
number of standard tRNAs extracted
Endozoicomonas sp.
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117984130
sample derived from
Endozoicomonas sp.
scientific_name
Pacbio Sequel II
sequencing method
NSU0020601
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
94e93ccd-9310-4b3b-8cf0-8dcf862fec05-asg-bin.61
title
jsCasXama1.Endozoicomonas_sp_1
tolid