No
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-07
ENA first public
ERC000050
ENA-CHECKLIST
Nova Southeastern University
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23978001
SRA accession
6128772d-f27e-44ee-8837-8bde4c1a3762
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage
binning parameters
MaxBin (version 2.2.7); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ| MARIA DEL PILAR| DANIEL TOLEDO
collected_by
UNIVERSITY OF PUERTO RICO MAYAGUEZ
collecting institution
2021-05-10
collection date
58.27
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
8.29
%
contamination score
adult hydrozoan tissue
environmental medium
Puerto Rico
geographic location (country and/or sea)
1.0
m
geographic location (depth)
17.96
DD
geographic location (latitude)
-67.05
DD
geographic location (longitude)
Cayo Enrique
geographic location (region and locality)
coral reef
habitat
adult
host life stage
Millepora alcicornis
host scientific name
not collected
host sex
544493
host taxid
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ
identified_by
UNIVERSITY OF PUERTO RICO MAYAGUEZ
identifier_affiliation
metagenome-assembled genome
investigation type
Hydrozoan: Millepora alcicornis
isolation_source
marine biome
local environmental context
hydrozoan metagenome
metagenomic source
29
number of standard tRNAs extracted
Gammaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA117984123
sample derived from
Gammaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
NSU0054605
specimen_id
Sanger Institute Genome PR20
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
6128772d-f27e-44ee-8837-8bde4c1a3762-asg-maxbin2.012
title
jhMilAlci5.Gammaproteobacteria_2
tolid