No
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-12
ENA first public
ERC000050
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23988850
SRA accession
b5676863-55c4-4a91-a56b-d96b0a10cbcd
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF DERBY
barcoding center
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
Kate Quigley
collected_by
Australian Institute of Marine Science
collecting institution
2020-11-13
collection date
74.66
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
dinoflagellate culture
environmental medium
Australia
geographic location (country and/or sea)
5
m
geographic location (depth)
-18.57
DD
geographic location (latitude)
146.49
DD
geographic location (longitude)
Palm Islands | N.Orpheus(Yuioldsite)
geographic location (region and locality)
NA
habitat
not applicable
host life stage
Symbiodinium sp. 240 249
host scientific name
not applicable
host sex
2885083
host taxid
Kate Quigley, Sam Noonan
identified_by
Australian Insitute of Marine Science
identifier_affiliation
metagenome-assembled genome
investigation type
Dinoflagellate: Symbiodinium sp. 240 249
isolation_source
marine biome
local environmental context
dinoflagellate metagenome
metagenomic source
31
number of standard tRNAs extracted
Simkaniaceae bacterium
organism
WHOLE ORGANISM
organism part
2020-11-13
original collection date
Australia | Palm Islands | N.Orpheus(Yuioldsite)
original collection location
ASG
project name
SAMEA117994972
sample derived from
Simkaniaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000254
specimen_id
NA
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
ani_screen
taxonomic identity marker
b5676863-55c4-4a91-a56b-d96b0a10cbcd-asg-bin.624
title
pySymSpec3.Simkaniaceae_1
tolid