Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-12
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23988620
SRA accession
01b2c63a-face-49f7-867f-47180574c955
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-08-04
collection date
86.85
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
4.75
%
contamination score
332
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
continental shelf
habitat
adult
host life stage
Petrosia crassa
host scientific name
not applicable
host sex
3115543
host taxid
HANS TORE RAPP
identified_by
UiB, Norway
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Petrosia crassa
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
61
number of standard tRNAs extracted
Candidatus Azotimanducaceae bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
beneficial
relationship
SAMEA117994512
sample derived from
Candidatus Azotimanducaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000294
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
01b2c63a-face-49f7-867f-47180574c955-asg-MAGScoT_cleanbin_000101
title
odPetCras1.Azotimanducaceae_6
tolid