Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-12
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23988166
SRA accession
eb1f5df6-d8a9-48a6-9648-ca60772a1eda
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2017-06-20
collection date
96.95
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
1.22
%
contamination score
1510
m
depth
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
54.19
DD
geographic location (latitude)
10.09
DD
geographic location (longitude)
Kiel | GEOMAR
geographic location (region and locality)
canyon
habitat
adult
host life stage
Chondrocladia robertballardi
host scientific name
not applicable
host sex
1688450
host taxid
PILAR RÌOS
identified_by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Chondrocladia robertballardi
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
36
number of standard tRNAs extracted
Candidatus Spongiihabitans sp.
organism
WHOLE ORGANISM
organism part
ToL
project name
unknown
relationship
SAMEA117994262
sample derived from
Candidatus Spongiihabitans sp.
scientific_name
Pacbio Sequel II
sequencing method
GHC0000284
specimen_id
NOT PROVIDED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
eb1f5df6-d8a9-48a6-9648-ca60772a1eda-asg-MAGScoT_cleanbin_000005
title
odChoRobe1.Spongiihabitans_sp_1
tolid