ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
ERS12478244
SRA accession
MoE-02may19-314
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT; kmer set 29,49,69,89,109,119,129,149
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
freshwater lake
broad-scale environmental context
2019-05-02
collection date
80.39
%
completeness score
checkm
completeness software
3.27
%
contamination score
Proteobacteria assembled from Lake Mondsee
description
fresh water
environmental medium
Austria
geographic location (country and/or sea)
47.806248
DD
geographic location (latitude)
13.398749
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation source
lake
local environmental context
freshwater metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB35640
project name
ERS4065072
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS4065072
title