No
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-15
ENA first public
ERC000050
ENA-CHECKLIST
The Sainsbury Laboratory
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS23997073
SRA accession
b5f1b6ac-7416-401e-ad12-6a35e421122c
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
THE SAINSBURY LABORATORY
barcoding center
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
terrestrial biome
broad-scale environmental context
DANIEL STANTON
collected_by
UNIVERSITY OF MINNESOTA
collecting institution
2021-06-22
collection date
50.52
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
adult lichen tissue
environmental medium
USA
geographic location (country and/or sea)
44.48
DD
geographic location (latitude)
-67.59
DD
geographic location (longitude)
Maine | Great Wass Island
geographic location (region and locality)
Coastal forest
habitat
not applicable
host life stage
Cystocoleus ebeneus
host scientific name
not applicable
host sex
476042
host taxid
DANIEL STANTON | ABIGAIL MEYER
identified_by
UNIVERSITY OF MINNESOTA
identifier_affiliation
metagenome-assembled genome
investigation type
Lichen: Cystocoleus ebeneus
isolation_source
forest biome
local environmental context
lichen metagenome
metagenomic source
25
number of standard tRNAs extracted
Acidobacteriaceae bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
NOT PROVIDED
proxy voucher
Hand collected
sample collection device or method
SAMEA118003122
sample derived from
Acidobacteriaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
SL0000005
specimen_id
NOT_PROVIDED
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
b5f1b6ac-7416-401e-ad12-6a35e421122c-asg-bin.755
title
xbHipHipp7.Acidobacteriaceae_13
tolid