SAMN48058529
External Id
New York City Department of Health and Mental Hygiene Public Health Laboratory Bioinformatics Unit
INSDC center name
2025-04-18T00:00:00Z
INSDC first public
2025-04-18T15:51:24.627Z
INSDC last update
SRS24784637
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS24784637
SRA accession
NYC Department of Environmental Protection
collected_by
2025-04-06
collection_date
NY047027073A
collection_site_id
ceres nanotrap
concentration_method
None
extraction_control
MagMAX Kit on KingFisher
extraction_method
USA: New York
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
CDC NWSS
project_name
public health surveillance community-level
purpose_of_ww_sampling
NYC DOHMH Public Health Laboratory
sequenced_by
SARS-CoV-2: wastewater surveillance sample from wastewater metagenome
title
90849882.816
ww_flow
257556
ww_population
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
nz
ww_surv_jurisdiction
20250406NY047027073A
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
33394.28571428572
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
SC2
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
GT Molecular Multiplex Kit
ww_surv_target_1_protocol