Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-22
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS24082434
SRA accession
0b759a36-5087-44a1-8135-4fb3fec4329e
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
WILLIAM GROSSMAN
collected_by
MARINE BIOLOGICAL LABORATORY
collecting institution
2024-04-10
collection date
91.97
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
adult sponge tissue
environmental medium
USA
geographic location (country and/or sea)
41.57
DD
geographic location (latitude)
-70.70
DD
geographic location (longitude)
Massachusettes | East Falmouth
geographic location (region and locality)
under a culvert bridge in 2' of water that has mostly sand and a few rocks. The area has good tidal flow.
habitat
juvenile
host life stage
Cliona celata
host scientific name
not provided
host sex
269049
host taxid
WILLIAM GROSSMAN
identified_by
MARINE BIOLOGICAL LABORATORY
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Cliona celata
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
46
number of standard tRNAs extracted
Spirochaetia bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA118088294
sample derived from
Spirochaetia bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000354
specimen_id
NOT COLLECTED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
0b759a36-5087-44a1-8135-4fb3fec4329e-asg-bin.37
title
odCliCela1.Spirochaetia_1
tolid