Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-22
ENA first public
ERC000050
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS24082406
SRA accession
9929eeb4-8ef8-4750-87d3-7019526a92a2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
NOT PROVIDED
barcoding center
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Victor Bonito
collected_by
Reef Explorer Fiji
collecting institution
2021-06-30
collection date
52.7
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
2.58
%
contamination score
2
m
depth
adult coral tissue
environmental medium
Fiji
geographic location (country and/or sea)
-18.21
DD
geographic location (latitude)
177.69
DD
geographic location (longitude)
Viti Levu | Coral Coast
geographic location (region and locality)
reef flat moat
habitat
adult
host life stage
Dipsastraea pallida
host scientific name
not applicable
host sex
2723967
host taxid
Victor Bonito
identified_by
Reef Explorer Fiji
identifier_affiliation
metagenome-assembled genome
investigation type
Coral: Dipsastraea pallida
isolation_source
marine biome
local environmental context
coral metagenome
metagenomic source
34
number of standard tRNAs extracted
Myxococcota bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
hammer, chisel, screw driver
sample collection device or method
SAMEA118088279
sample derived from
Myxococcota bacterium
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000336
specimen_id
FJTOL-2
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
9929eeb4-8ef8-4750-87d3-7019526a92a2-asg-MAGScoT_cleanbin_000017
title
jaDipPall1.Myxococcota_1
tolid