Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-22
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS24082532
SRA accession
e35d6a88-7679-475d-bf1a-be15eb87bbc7
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
Andia Chaves Fonnegra
collected_by
FLORIDA ATLANTIC UNIVERSITY
collecting institution
2022-07-11
collection date
92.47
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
1
m
depth
adult sponge tissue
environmental medium
USA
geographic location (country and/or sea)
24.66
DD
geographic location (latitude)
-81.45
DD
geographic location (longitude)
Florida | Summerland Key
geographic location (region and locality)
seagrass/macroalgae
habitat
adult
host life stage
Spongia barbara
host scientific name
not applicable
host sex
1979531
host taxid
Andia Chaves Fonnegra
identified_by
FLORIDA ATLANTIC UNIVERSITY
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Spongia barbara
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
42
number of standard tRNAs extracted
Alphaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
unknown
relationship
SAMEA118088412
sample derived from
Alphaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000340
specimen_id
NOT COLLECTED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
e35d6a88-7679-475d-bf1a-be15eb87bbc7-asg-MAGScoT_cleanbin_000004
title
odSpoBarb1.Alphaproteobacteria_1
tolid