Yes
16S recovered
PROKKA (version 1.14.6)
16S recovery software
2025-04-22
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS24082466
SRA accession
80a07e34-7aa6-4b43-93f2-10e3ce3875ad
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
JACOB MUSSER
collected_by
YALE UNIVERSITY
collecting institution
2024-02-12
collection date
Mueller's freshwater sponge
common name
94.09
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
adult sponge tissue
environmental medium
Germany
geographic location (country and/or sea)
47.60
DD
geographic location (latitude)
9.54
DD
geographic location (longitude)
Bodensee | Langenargen
geographic location (region and locality)
Underside of wood ferry dock in Lake Constance
habitat
juvenile
host life stage
Ephydatia muelleri
host scientific name
not provided
host sex
6052
host taxid
JACOB MUSSER
identified_by
YALE UNIVERSITY
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Ephydatia muelleri
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
45
number of standard tRNAs extracted
Alphaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
ToL
project name
SAMEA118088316
sample derived from
Alphaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000356
specimen_id
NOT COLLECTED
specimen_voucher
N
symbiont
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
80a07e34-7aa6-4b43-93f2-10e3ce3875ad-asg-MAGScoT_cleanbin_000011
title
odEphMuel3.Alphaproteobacteria_2
tolid