SAMN06450486
External Id
University of Queensland
INSDC center name
2017-02-27T00:00:00Z
INSDC first public
2025-04-25T21:06:29.488Z
INSDC last update
SRS2031754
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2031754
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
99.66%
completeness_estimated
0.51%
contamination_estimated
true
environmental sample
52.59
genome coverage
UBA5045
isolate
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
isolation-source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
marine metagenome
metagenome source
true
metagenomic
Paraglaciecola chathamensis
http://purl.obolibrary.org/obo/NCBITaxon_368405
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Genome binned from sequencing reads available in ERX556345 metagenome
subsrc_note
Uncultivated Paraglaciecola agarilytica UBA5045 genome recovered from ERX556345
title
This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599341.
value