2025-05-18
ENA first public
ERC000050
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
bbmap v38.86
MAG coverage software
ERS24518233
SRA accession
K1488-mx-bin02
Submitter Id
0.5
L
amount or size of sample collected
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
Flye v2.9.1
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin2
binning software
cell culture
broad-scale environmental context
2022-02-05
collection date
conserved marker genes
completeness approach
99.34
%
completeness score
CheckM v1.1.3
completeness software
0.44
%
contamination score
MMSeqs2 and GTDB R220
decontamination software
K1488-mx-bin02: from culture of Storeatula sp. K-1488
description
liquid water
environmental medium
Czech Republic
geographic location (country and/or sea)
48.9751483
DD
geographic location (latitude)
14.4574861
DD
geographic location (longitude)
mono-eukaryotic culture
isolation_source
cell culture of eukaryotic microbes
local environmental context
aquatic metagenome
metagenomic source
Winogradskyella ouciana
organism
PRJEB79909
project name
ERS21388239
sample derived from
Winogradskyella ouciana
scientific_name
GTDBTk v2.4.0
taxonomic classification
multi-marker approach
taxonomic identity marker
K1488-mx-bin02
title