2025-05-18
ENA first public
ERC000050
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
bbmap v38.86
MAG coverage software
ERS24518192
SRA accession
C9799-m1-bin08
Submitter Id
0.5
L
amount or size of sample collected
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
Flye v2.9.1
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin2
binning software
marine biome
broad-scale environmental context
2020-09-16
collection date
conserved marker genes
completeness approach
99.35
%
completeness score
CheckM v1.1.3
completeness software
0
%
contamination score
MMSeqs2 and GTDB R220
decontamination software
C9799-m1-bin08: from culture of Rhodomonas baltica CCAP 979/9
description
liquid water
environmental medium
United Kingdom
geographic location (country and/or sea)
56.4513
DD
geographic location (latitude)
-5.4404
DD
geographic location (longitude)
eukaryotic culture
isolation_source
tidal pool
local environmental context
aquatic metagenome
metagenomic source
Cyclobacteriaceae bacterium
organism
PRJEB55799 
project name
SAMEA8100079
sample derived from
Cyclobacteriaceae bacterium
scientific_name
GTDBTk v2.4.0
taxonomic classification
multi-marker approach
taxonomic identity marker
C9799-m1-bin08
title