2025-05-28
ENA first public
ERC000013
ENA-CHECKLIST
Stanford University School of Medicine
INSDC center name
public
INSDC status
ERS22564059
SRA accession
F405_CHD_L1_FF07295352
Submitter Id
ENVO_01000313
broad-scale environmental context
2021-04-03
collection date
NSG mouse F405 from litter 1 in Stanford colony, co-housed in cage 4D with diarrheic mouse, sampled 25 days after cohousing began
description
ENVO_00002003
environmental medium
USA
geographic location (country and/or sea)
37.42784
DD
geographic location (latitude)
-122.17
DD
geographic location (longitude)
Stanford, California
geographic location (region and locality)
Feces
host body site
Mus musculus
host scientific name
female
host sex
F405
host subject id
NOD scid gamma (NSG)
host subspecific genetic lineage
10090
host taxid
ENVO_2100002
local environmental context
mouse gut metagenome
organism
co-housed with diarrheic mouse for 25 days
perturbation
Metagenome sequencing of NSG mice with diarrhea
project name
diarrhea
sample disease status
mouse gut metagenome
scientific_name
F405_CHD_L1_FF07295352
title