2025-05-30
ENA first public
ERC000011
ENA-CHECKLIST
MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh
INSDC center name
public
INSDC status
ERS20182796
SRA accession
E-MTAB-14144:cast_normal_liver_16_44001
Submitter Id
15
day
age
ArrayExpress
broker name
not collected
collection date
house mouse
common name
Protocols: Livers from mice were isolated and flash frozen at -80°C. No diethylnitrosamine treatment was administered to animals Samples were treated as previously described in Omni-ATAC protocol (Corces et al. 2017), with minor modifications to the nuclear isolation steps (in Step 1, 1 ml of 1× homogeniser buffer was used instead of 2 ml; in Step 4, douncing was performed with 30 strokes instead of 20). ATAC-seq was performed as described previously (Corces et al. 2017).
description
P15
developmental stage
03/11/16
dob
genetic modification
wild type genotype
genotype
not collected
geographic location (country and/or sea)
16_44001
individual
not applicable
isolate
Mus musculus
organism
Mus musculus
organism
liver
organism part
16_26347/16_26344
parents (mother/father)
sampling site
Mus musculus
scientific_name
male
sex
CAST/EiJ
strain
cast_normal_liver_16_44001
title