2025-06-01
ENA first public
ERC000011
ENA-CHECKLIST
The Racah Institute of Physics The Hebrew University of Jerusalem Jerusalem 9112001, Israel
INSDC center name
public
INSDC status
ERS18601497
SRA accession
E-MTAB-13944:Sample 1
Submitter Id
ArrayExpress
broker name
not collected
collection date
Protocols: Microcolonies were selected from urine of a patient with a UTI infection on LB plate are kept at -80C. Bacteria were regrown in LB at 37C with shaking for 5h. DNA was extracted from 1 mL of bacteria using the DNeasy Blood & Tissue Kit (Qiagen).  Pacbio library preparation and sequencing was carried-out by BGI on one of the technical samples (UTI_30). SMRTbell prep kit 3.0 was used
description
urinary tract infection
disease
not collected
geographic location (country and/or sea)
microcolony bacterial culture from UTI patient
growth condition
not applicable
isolate
mixed sample
organism
mixed sample
organism
whole organism
organism part
mixed sample
scientific_name
Sample 1
title