ERC000011
ENA-CHECKLIST
SAMEA118366758
External Id
Station Biologique de Roscoff
INSDC center name
48.7717
DD
Latitude Start
-3.9683
DD
Longitude Start
English Channel
Marine Region
SSUV4V5_3
Protocol Label
ERS24753489
SRA accession
SOMLIT
Sampling Campaign
Research Vessel Neomysis
Sampling Platform
SOMLIT-Astan
Sampling Site
3 µm
Size Fraction Lower Threshold
NA
Size Fraction Upper Threshold
RA100805_3_SSUV4V5
Submitter Id
neritic epipelagic zone biome [ENVO:01000042]
broad-scale environmental context
2010-08-05
collection date
1
m
depth
> 3 µm water sample collected the 2010-08-05 at the Astan SOMLIT station for DNA metabarcoding using SSU V4V5 primers (515F-Y / 926R)
description
sea water [ENVO:00002149]
environmental medium
water
environmental package
France
geographic location (country and/or sea)
marine photic zone [ENVO:00000209]
local environmental context
marine metagenome
organism
marine metagenome
organism
515F-Y (5'-GTGYCAGCMGCCGCGGTAA-3') and 926R (5'-CCGYCAATTYMTTTRAGTTT-3')
pcr primers
SOMLIT-Astan metabarcoding SSU V4V5
project name
5L Niskin bottle
sample collection device or method
marine metagenome
scientific_name
marine metagenome
scientific_name
SSU rRNA
target gene
V4V5
target subfragment
SSUV4V5_3 sample from the 2010-08-05
title