2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24937359
SRA accession
SRR24458087_concoct_48
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
spades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2013-11-30
collection date
92.81
%
completeness score
CheckM2_v1.0.1
completeness software
1.09
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR24458087 of study SRP436270.
description
marine sediment
environmental medium
Denmark
geographic location (country and/or sea)
56.13889000
DD
geographic location (latitude)
10.21419000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
cable bacteria
local environmental context
sediment metagenome
metagenomic source
Candidatus Electrothrix marina
organism
This projects aims to explore genomes of filamentous, electron-conducting Desulfobulbaceae (cable bacteria) from different geographic locations. Draft genomes of studied cable bacteria were re-constructed from low-complexity metagenomes derived from single bacterial filaments.
project name
SAMN03420850
sample derived from
Candidatus Electrothrix marina
scientific_name
Ion Torrent PGM
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR24458087_concoct_48
title