2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24937356
SRA accession
ERR5037040_binner12_Refined_3
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2016-04-18
collection date
57.65
%
completeness score
CheckM2_v1.0.1
completeness software
1.38
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR5037040 of study ERP126160.
description
marine sediment
environmental medium
South Korea
geographic location (country and/or sea)
32.50000000
DD
geographic location (latitude)
125.50000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment
local environmental context
sediment metagenome
metagenomic source
uncultured Syntrophobacterales bacterium
organism
whole metagenomic sequencing for Jeju sediment microbiomes
project name
SAMEA7758360
sample derived from
uncultured Syntrophobacterales bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR5037040_binner12_Refined_3
title