2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24935226
SRA accession
SRR6823441_binner13_Refined_3
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaspadesv3.11.1
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
subseafloor
broad-scale environmental context
EBI-EMG
broker name
2009-11-30
collection date
96.25
%
completeness score
CheckM2_v1.0.1
completeness software
2.4
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR6823441 of study SRP134683.
description
sediment
environmental medium
Mexico
geographic location (country and/or sea)
27.01540000
DD
geographic location (latitude)
-111.37980000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
background
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Subseafloor sediment microbial communities from the background core at a depth of 12-15 cm, 2000m below sea level
project name
SAMN07632362
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR6823441_binner13_Refined_3
title