2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24935268
SRA accession
SRR6823441_metabat2_5
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspadesv3.11.1
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
subseafloor
broad-scale environmental context
EBI-EMG
broker name
2009-11-30
collection date
90.51
%
completeness score
CheckM2_v1.0.1
completeness software
1.85
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR6823441 of study SRP134683.
description
sediment
environmental medium
Mexico
geographic location (country and/or sea)
27.01540000
DD
geographic location (latitude)
-111.37980000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
background
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Subseafloor sediment microbial communities from the background core at a depth of 12-15 cm, 2000m below sea level
project name
SAMN07632362
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR6823441_metabat2_5
title