2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24937401
SRA accession
SRR13515396_concoct_12
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
deep subsurface marine
broad-scale environmental context
EBI-EMG
broker name
2018-05-31
collection date
72.28
%
completeness score
CheckM2_v1.0.1
completeness software
0.8
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR13515396 of study SRP247392.
description
marine sediment
environmental medium
Canada
geographic location (country and/or sea)
43.01048500
DD
geographic location (latitude)
-60.21169600
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
slope
local environmental context
sediment metagenome
metagenomic source
uncultured Hyphomicrobium sp.
organism
Thermophilic endospore dispersal is facilitated by geofluid migration on the Scotian Slope, NW Atlantic.
project name
SAMN17348065
sample derived from
uncultured Hyphomicrobium sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR13515396_concoct_12
title