2025-06-12
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA113592924
External Id
MAX PLANCK INSTITUTE BIOLOGY TUEBINGEN
INSDC center name
2023-06-12T11:29:58Z
INSDC last update
public
INSDC status
ERS15587575
SRA accession
MI-195-H__metabat2_low_PE.012
Submitter Id
Many fragments with little no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes v.3.12.0
assembly software
--minContig 2000 --minCV 0.5 --minCVSum 0.5 --maxP 92 --maxEdges 150 --seed 8394
binning parameters
MetaBAT2 v.2.12.1
binning software
Homo sapiens
broad-scale environmental context
2014-07-01
collection date
CheckM v.1.0.13
completeness software
fecal material
environmental medium
Colombia
geographic location (country and/or sea)
4.624335
geographic location (latitude)
-74.063644
geographic location (longitude)
metagenome-assembled genome
investigation type
human metagenome
isolation_source
digestive tract
local environmental context
human gut metagenome
metagenomic source
Eubacterium sp. CAG:180
organism
PRJEB58436
project name
ERS14606607
sample derived from
Eubacterium sp. CAG:180
scientific_name
Illumina HiSeq
sequencing method
multi-marker
taxonomic identity marker
Col_Meta__MI-195-H__metabat2_low_PE.012
title