2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24937205
SRA accession
SRR17063066_concoct_38
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2019-07-23
collection date
67.23
%
completeness score
CheckM2_v1.0.1
completeness software
3.92
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR17063066 of study SRP348351.
description
marine sediment
environmental medium
China
geographic location (country and/or sea)
17.98689000
DD
geographic location (latitude)
111.00278000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
sediment
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Metagenomes of deep-sea sediment samples from the South China Sea and near the Mariana Trench
project name
SAMN23489470
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR17063066_concoct_38
title