2025-06-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24937471
SRA accession
SRR19160658_binner23_Refined_11
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2017-05-31
collection date
80.2
%
completeness score
CheckM2_v1.0.1
completeness software
0.66
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR19160658 of study SRP373673.
description
marine sediment
environmental medium
Mexico
geographic location (country and/or sea)
19.91916700
DD
geographic location (latitude)
-94.34750000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
gulf
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Sediments from the Gulf of Mexico (GoM) harbor an incredible microbial community. In order to study at its fullest it is important to consider archaea and bacteria along with their metabolic potential.
project name
SAMN28180583
sample derived from
uncultured bacterium
scientific_name
Illumina MiSeq
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR19160658_binner23_Refined_11
title