2
COVID-19 Wave
SAMN48730647
External Id
Uppsala university
INSDC center name
2025-06-10T00:00:00Z
INSDC first public
2025-06-10T04:18:02.475Z
INSDC last update
SRS25168355
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
6
Patient Length of Stay
SRS25168355
SRA accession
Philip Karlsson
collected_by
2020-12-18
collection_date
Illumina short-read
description
Sweden: Uppsala
geo_loc_name
Homo sapiens
host
COVID-19 ICU
host_description
UTI
host_disease
Discharged
host_disease_outcome
Intensive care
host_health_state
male
host_sex
HWP078
host_subject_id
Urine
host_tissue_sampled
HWP078:1A
isolate
Catheter urine
isolation_source
59.8586 N 17.6389 E
lat_lon
Enterococcus sp.
http://purl.obolibrary.org/obo/NCBITaxon_35783
organism
Urine to chromogenic agar (1), chromogenic agar to BHI agar (2), overnight culture in BHI (3)
passage_history
ST26
serotype
E. faecalis HWP078:1A
strain
Pathogen: clinical or host-associated sample from Enterococcus sp.
title