SAMN48964104
External Id
G10K
INSDC center name
2025-06-09T00:00:00Z
INSDC first public
2025-06-09T10:36:06.260Z
INSDC last update
SRS25310627
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS25310627
SRA accession
Stanford University: David Ramirez
biomaterial_provider
Lindsay Sailer
collected_by
2022-04-04
collection_date
The meadow vole (Microtus pennsylvanicus) is a North American vole found in eastern Canada and the United States. Its range extends farther south along the Atlantic coast (from Wikipedia entry). This sample of a male individual found in Ithaca, New York, was procured by Lindsay Sailer and David Ramirez, and coordinated by Lauren O'Connell and Jessica Nowicki to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Oliver Fedrigo, Giulio Formenti, and Jennifer Balacco.
description
adult
dev_stage
USA: Ithaca, New York
geo_loc_name
mMicPen1
isolate
42.4534 N 76.4735 W
lat_lon
Microtus pennsylvanicus
http://purl.obolibrary.org/obo/NCBITaxon_10058
organism
male
sex
-80oC
store_cond
muscle
tissue
Animal sample from Microtus pennsylvanicus (meadow vole) for VGP transcriptome, mMicPen1 - muscle
title
Fresh frozen
treatment