SAMN48948842
External Id
Jomo Kenyatta University of Agriculture and Technology
INSDC center name
2025-06-08T00:00:00Z
INSDC first public
2025-06-08T02:01:03.220Z
INSDC last update
SRS25299293
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS25299293
SRA accession
2022-08/2022-10
collection_date
Pooled rhizosphere soil sample from 35 bacterial wilt-infected tomato plants collected in Kirinyaga, Laikipia, and Kiambu counties, Kenya. Samples were combined for metagenomic sequencing. Centroid coordinates represent the sampling region
description
Kenya: Kirinyaga, Kiambu, Laikipia
geo_loc_name
tomato plant
host
Tomato rhizosphere soil (infected with bacterial wilt)
isolation_source
0.441 S 37.150 E
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
Sterile spatula and polyethylene bags
samp_collect_device
DNA extracted using phenol-chloroform method
samp_mat_process
35 samples pooled
samp_size
Pooled rhizosphere soil from bacterial wilt-infected tomato plants in Kenya (2022)
title