1
COVID-19 Wave
SAMN48730662
External Id
Uppsala university
INSDC center name
2025-06-10T00:00:00Z
INSDC first public
2025-06-10T04:18:02.391Z
INSDC last update
SRS25168371
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
34
Patient Length of Stay
SRS25168371
SRA accession
Philip Karlsson
collected_by
2020-06-19
collection_date
Illumina short-read
description
Sweden: Uppsala
geo_loc_name
Homo sapiens
host
COVID-19 ICU
host_description
UTI
host_disease
Discharged
host_disease_outcome
Intensive care
host_health_state
female
host_sex
HWP004
host_subject_id
Urine
host_tissue_sampled
HWP004:11P
isolate
Catheter urine
isolation_source
59.8586 N 17.6389 E
lat_lon
Enterococcus sp.
http://purl.obolibrary.org/obo/NCBITaxon_35783
organism
Urine to chromogenic agar (1), chromogenic agar to BHI agar (2), overnight culture in BHI (3)
passage_history
Unknown
serotype
E. durans HWP004:11P
strain
Pathogen: clinical or host-associated sample from Enterococcus sp.
title