2025-06-17
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25049194
SRA accession
SRR6194934_binner13_Refined_61
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.12.0
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2011-12-05
collection date
69.64
%
completeness score
CheckM2_v1.0.1
completeness software
1.92
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR6194934 of study SRP120587.
description
marine sediment
environmental medium
USA
geographic location (country and/or sea)
37.56901700
DD
geographic location (latitude)
-122.10243300
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
pond two c
local environmental context
sediment metagenome
metagenomic source
uncultured Phycisphaerae bacterium
organism
Marine sediment microbial community from Union City, CA, USA - Pond 2C Sediment 2 metagenome
project name
SAMN06268912
sample derived from
uncultured Phycisphaerae bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR6194934_binner13_Refined_61
title