2025-06-17
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25049202
SRA accession
SRR6193154_binner13_Refined_2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.12.0
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2011-12-16
collection date
73.68
%
completeness score
CheckM2_v1.0.1
completeness software
3.48
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR6193154 of study SRP120580.
description
marine sediment
environmental medium
Puerto Rico
geographic location (country and/or sea)
17.96725000
DD
geographic location (latitude)
-67.01887330
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
prtt sediment three
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Marine sediment microbial community from La Parguera, Puerto Rico - PR Tt Sediment 3 metagenome
project name
SAMN06268954
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR6193154_binner13_Refined_2
title