2025-06-20
ENA first public
ERC000011
ENA-CHECKLIST
Station Biologique de Roscoff
INSDC center name
public
INSDC status
48.7717
DD
Latitude Start
-3.9683
DD
Longitude Start
English Channel
Marine Region
18SV1V2_3
Protocol Label
ERS25057728
SRA accession
SOMLIT
Sampling Campaign
Research Vessel Neomysis
Sampling Platform
SOMLIT-Astan
Sampling Site
3 µm
Size Fraction Lower Threshold
NA
Size Fraction Upper Threshold
RA121009_3_18SV1V2
Submitter Id
neritic epipelagic zone biome [ENVO:01000042]
broad-scale environmental context
2012-10-09
collection date
1
m
depth
> 3 µm water sample collected the 2012-10-09 at the Astan SOMLIT station for DNA metabarcoding using 18S V1V2 primers (F04 / 22R)
description
sea water [ENVO:00002149]
environmental medium
water
environmental package
France
geographic location (country and/or sea)
marine photic zone [ENVO:00000209]
local environmental context
uncultured eukaryote
organism
F04 (5'-GCTTGTCTCAAAGATTAAGCC-3') and 22R (5'-GCCTGCTGCCTTCCTTGGA-3')
pcr primers
SOMLIT-Astan metabarcoding 18S V1V2
project name
5L Niskin bottle
sample collection device or method
uncultured eukaryote
scientific_name
18S rRNA
target gene
V1V2
target subfragment
18SV1V2_3 sample from the 2012-10-09
title