2025-06-26
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS23861690
SRA accession
N-BiE-22sep22-058
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
FLYE
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin
binning software
freshwater biome
broad-scale environmental context
2022-09-22
collection date
98.19
%
completeness score
CheckM
completeness software
0
%
contamination score
Allofontibacter communis assembled from Lake Biwa, Japan
description
natural lake
environmental medium
Japan
geographic location (country and/or sea)
35.22756
DD
geographic location (latitude)
136.0249
DD
geographic location (longitude)
Lake Biwa
isolation_source
freshwater lake
local environmental context
lake water metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB86003
project name
ERS23657623
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
multi-marker approach
taxonomic identity marker
N-BiE-22sep22-058
title