2025-06-26
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS23861809
SRA accession
N-LaCa1-17jan24-C29
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
FLYE
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin
binning software
freshwater biome
broad-scale environmental context
2024-01-17
collection date
53.7
%
completeness score
CheckM
completeness software
0
%
contamination score
Pelagibacter sp. assembled from Laguna de Castillos - Station 1, Uruguay
description
lagoon
environmental medium
Uruguay
geographic location (country and/or sea)
-34.3499
DD
geographic location (latitude)
-53.939
DD
geographic location (longitude)
Laguna de Castillos - Station 1
isolation_source
brackish lake
local environmental context
lagoon metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB86000
project name
ERS23657635
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
multi-marker approach
taxonomic identity marker
N-LaCa1-17jan24-C29
title