2025-06-26
ENA first public
ERC000047
ENA-CHECKLIST
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC center name
public
INSDC status
ERS23861767
SRA accession
N-LaCa2-17jan24-061
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
FLYE
assembly software
coverage and kmer
binning parameters
MetaBAT, MetaBAT2, MaxBin
binning software
freshwater biome
broad-scale environmental context
2024-01-17
collection date
82.57
%
completeness score
CheckM
completeness software
4.03
%
contamination score
Pelagibacter sp. assembled from Laguna de Castillos - Station 2, Uruguay
description
lagoon
environmental medium
Uruguay
geographic location (country and/or sea)
-34.348
DD
geographic location (latitude)
-53.8799
DD
geographic location (longitude)
Laguna de Castillos - Station 2
isolation_source
brackish lake
local environmental context
lagoon metagenome
metagenomic source
Candidatus Pelagibacterales bacterium
organism
PRJEB86000
project name
ERS23657636
sample derived from
Candidatus Pelagibacterales bacterium
scientific_name
multi-marker approach
taxonomic identity marker
N-LaCa2-17jan24-061
title