2025-06-23
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS24947441
SRA accession
SRR8709623_binner13_Refined_28
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
subseafloor
broad-scale environmental context
EBI-EMG
broker name
2014-11
collection date
73.23
%
completeness score
CheckM2_v1.0.1
completeness software
0.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR8709623 of study SRP188113.
description
sediment
environmental medium
Pacific Ocean
geographic location (country and/or sea)
11.91000000
DD
geographic location (latitude)
144.93000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
background
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
Assembled metagenomes from the Mariana and Kermadec trenches
project name
SAMN11095932
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR8709623_binner13_Refined_28
title