2025-06-23
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25050238
SRA accession
SRR4028170_binner123_Refined_30
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaspades_v3.11.1
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine
broad-scale environmental context
EBI-EMG
broker name
2012-08
collection date
90.63
%
completeness score
CheckM2_v1.0.1
completeness software
0.75
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4028170 of study SRP081824.
description
marine sediment
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
-15.16000000
DD
geographic location (latitude)
-13.35000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sediment metagenome
isolation_source
hydrothermal vent
local environmental context
sediment metagenome
metagenomic source
uncultured bacterium
organism
South Mid Atlantic Ridge hydrothermal vent sediment bacteria metagenome
project name
SAMN05571518
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR4028170_binner123_Refined_30
title