2025-07-01
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA115091248
External Id
Advanced Centre for Treatment Research and Education in Cancer
INSDC center name
2024-01-09T13:21:39Z
INSDC last update
public
INSDC status
ERS17714399
SRA accession
E-MTAB-13697:AD3407
Submitter Id
70
year
age
ArrayExpress
broker name
not collected
collection date
human
common name
Protocols: The FFPE tumor tissues were collected from ACTREC-TMC The 38 FFPE orphan tumor samples has been subjected to microtome-sectioning where ~5-6 sections of 10 um has been taken based on the tissue abundance for DNA extraction. The DNA extraction from has been performed according to standard protocol of Qiagen's DNeasy FFPE tissue kits. The DNA concentration was measured using Nanodrop 2000c spectrophotometer. Using the Illumina DNA Prep with enrichment Kit, formerly known as the TruSeq DNA Access Library Prep Kit, whole exome sequencing was done on 38 FFPE samples of anaplastic thyroid cancer.
description
adult
developmental stage
Anaplastic thyroid cancer
disease
not collected
geographic location (country and/or sea)
not applicable
isolate
Homo sapiens
organism
Homo sapiens
organism
thyroid gland
organism part
tumor
sampling site
Homo sapiens
scientific_name
female
sex
AD3407
title