2025-07-06
ENA first public
ERC000025
ENA-CHECKLIST
SAMEA114003961
External Id
UNIVERSITY OF SZEGED
INSDC center name
2023-07-06T22:50:27Z
INSDC last update
public
INSDC status
ERS15987808
SRA accession
BACMIX_illumina_v1_v2_20221104_macherey_nagel_MN2I_R2
Submitter Id
Quick-16S-AdapterFw-(TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG), Quick-16S-AdapterRev-GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG and Illumina P5 5'-(AATGATACGGCGACCACCGA), P7 5'-(CAAGCAGAAGACGGCATACGAGAT)
adapters
ZymoBIOMICS Microbial Community Standard Cat.Number: D6300
annotation source
Csongrad county
broad-scale environmental context
2021-12-01
collection date
BACMIX_Illumina_v1_v2_20221104_Macherey_nagel_MachereyNagel2I_Read2
description
ZymoBIOMICS� Microbial Community Standard
environmental medium
Hungary
geographic location (country and/or sea)
46.248755
DD
geographic location (latitude)
20.145766
DD
geographic location (longitude)
Szeged
local environmental context
5-(ACCTGGAT ) and 3-( TTCTAGAC)
multiplex identifiers
mixed culture metagenome
organism
1.4 x 1010 cells/ml
organism count
initial denaturation:95degC_10min; denaturation=95degC_30sec; annealing=55deg_30sec; extension=72deg_3min
pcr conditions
ZymoBIOMICS Microbial Community Standard
positive control type
Comparative metagenomic profiling of canine gut microbial community using different sample preparation methodes
project name
https://s3.amazonaws.com/zymo-files/BioPool/ZymoBIOMICS.STD.refseq.v2.zip
relevant electronic resources
mixed culture metagenome
scientific_name
software
sequence quality check
Illumina MiSeq v2 500 nano
sequencing method
BACMIX_illumina_v1_v2_20221104_macherey_nagel_MN2I_R2
title