2025-07-10
ENA first public
ERC000047
ENA-CHECKLIST
GFZ German Research Centre for Geosciences
INSDC center name
public
INSDC status
ERS25196738
SRA accession
unclassified Methanoperidens
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSpades
assembly software
Completeness-5*Contamination >50 ) & (Length_scaffolds >=50000) & (Ambigious_bases <1e6) & (N50 > 5000) & (N_scaffolds < 1000)
binning parameters
vamb
binning software
in thermokarst lakes
broad-scale environmental context
2017
collection date
95.37
%
completeness score
checkm
completeness software
2.61
%
contamination score
sediment from thermokarst lakes from Bykovsky, Siberian coastal permafrost region
description
environmental material
environmental medium
Russia
geographic location (country and/or sea)
71.75
DD
geographic location (latitude)
129.25
DD
geographic location (longitude)
thermokarst lake sediments
isolation_source
Siberian coastal permafrost
local environmental context
lake sediment metagenome
metagenomic source
Candidatus Methanoperedens nitroreducens
organism
Polar Fox Lagoon sediment Metagenome
project name
SRR19116063-SRR19116074
sample derived from
Candidatus Methanoperedens nitroreducens
scientific_name
multiple markers
taxonomic identity marker