2025-07-14
ENA first public
ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
public
INSDC status
ERS25228123
SRA accession
SAMPLE_1478_concoct_bin.18
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2014-05-20
collection date
73.78
%
completeness score
EukCC_v0.2
completeness software
1.7
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR1647058 of study SRP049645.
description
missing: third party data
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Um
local environmental context
human skin metagenome
metagenomic source
Malassezia globosa
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS741375
sample derived from
Malassezia globosa
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_1478_concoct_bin.18
title