ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25219492
SRA accession
SAMPLE_912_bin.2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2016-11
collection date
74.43
%
completeness score
CheckM_v1.1.2
completeness software
2.41
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR11300717 of study SRP251660.
description
Skin
environmental medium
China
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Cheek
local environmental context
human skin metagenome
metagenomic source
uncultured Bacteriovorax sp.
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS6313649
sample derived from
uncultured Bacteriovorax sp.
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_912_bin.2
title