ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25220655
SRA accession
SAMPLE_2672_bin.2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2013/2014
collection date
54.87
%
completeness score
CheckM_v1.1.2
completeness software
0.09
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR3726344 of study SRP077514.
description
missing: third party data
environmental medium
USA
geographic location (country and/or sea)
40.4308
DD
geographic location (latitude)
-79.9598
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
missing: third party data
local environmental context
human skin metagenome
metagenomic source
Enterococcus faecalis
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS1529651
sample derived from
Enterococcus faecalis
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_2672_bin.2
title