ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25220162
SRA accession
SAMPLE_1626_bin.2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
not applicable
collection date
90.21
%
completeness score
CheckM_v1.1.2
completeness software
0.66
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR1950715 of study SRP056821.
description
missing: third party data
environmental medium
not applicable
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
missing: third party data
local environmental context
human skin metagenome
metagenomic source
Cutibacterium acnes
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS892079
sample derived from
Cutibacterium acnes
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_1626_bin.2
title