ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25220256
SRA accession
SAMPLE_1688_bin.1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2013-10-26
collection date
66.65
%
completeness score
CheckM_v1.1.2
completeness software
0.0
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR2005645 of study SRP057859.
description
organic_material
environmental medium
Italy
geographic location (country and/or sea)
46.0667
DD
geographic location (latitude)
11.1167
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
right retroauricular crease
local environmental context
human skin metagenome
metagenomic source
Staphylococcus epidermidis
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS927144
sample derived from
Staphylococcus epidermidis
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_1688_bin.1
title