ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25219488
SRA accession
SAMPLE_908_bin.2
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2016-11
collection date
94.41
%
completeness score
CheckM_v1.1.2
completeness software
0.0
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR11300712 of study SRP251660.
description
Skin
environmental medium
China
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Scalp
local environmental context
human skin metagenome
metagenomic source
Lawsonella clevelandensis
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS6313654
sample derived from
Lawsonella clevelandensis
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_908_bin.2
title