ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25218627
SRA accession
SAMPLE_334_bin.3
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2013-05-22
collection date
50.74
%
completeness score
CheckM_v1.1.2
completeness software
1.18
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic runs SRR1633153, SRR1633154, SRR1633155, SRR1633156, SRR1633157, SRR1633158 of study SRP002480.
description
Ss
environmental medium
USA
geographic location (country and/or sea)
38.984652
DD
geographic location (latitude)
-77.094709
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Ra-R
local environmental context
human skin metagenome
metagenomic source
Lawsonella clevelandensis
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS732139
sample derived from
Lawsonella clevelandensis
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_334_bin.3
title