ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25220083
SRA accession
SAMPLE_1548_bin.13
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2014-02-25
collection date
99.05
%
completeness score
CheckM_v1.1.2
completeness software
1.42
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR1647183 of study SRP049645.
description
missing: third party data
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Um
local environmental context
human skin metagenome
metagenomic source
uncultured Mobiluncus sp.
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS741503
sample derived from
uncultured Mobiluncus sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_1548_bin.13
title