ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25219423
SRA accession
SAMPLE_885_bin.6
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2018-12
collection date
95.26
%
completeness score
CheckM_v1.1.2
completeness software
0.06
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR14198839 of study SRP314237.
description
swab
environmental medium
USA
geographic location (country and/or sea)
38.999838
DD
geographic location (latitude)
-77.106017
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
Vf
local environmental context
human skin metagenome
metagenomic source
Gordonia bronchialis
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS8671949
sample derived from
Gordonia bronchialis
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_885_bin.6
title