ERC000050
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
ERS25220689
SRA accession
SAMPLE_2695_bin.1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v3.13.0
assembly software
--maxbin2 --metabat2 --concoct
binning parameters
metaWRAP_v1.2.1
binning software
human skin
broad-scale environmental context
2015-09-23
collection date
100
%
completeness score
CheckM_v1.1.2
completeness software
1.3
%
contamination score
This sample represents a binned metagenome assembled from the metagenomic run SRR6757699 of study SRP133226.
description
missing: third party data
environmental medium
USA
geographic location (country and/or sea)
40.28
DD
geographic location (latitude)
-76.65
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin metagenome
isolation_source
face
local environmental context
human skin metagenome
metagenomic source
uncultured Brevundimonas sp.
organism
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
project name
SRS2987335
sample derived from
uncultured Brevundimonas sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
binned metagenome: SAMPLE_2695_bin.1
title