2025-07-29
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25335409
SRA accession
SRR12192802_binner23_Refined_1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2019-06-16
collection date
80.06
%
completeness score
CheckM2_v1.0.1
completeness software
0.78
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12192802 of study SRP271247.
description
maize
environmental medium
South Africa
geographic location (country and/or sea)
-25.59000000
DD
geographic location (latitude)
26.31000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Sphingomonas sp.
organism
Maize rhizosphere sequence
project name
SAMN15502455
sample derived from
uncultured Sphingomonas sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR12192802_binner23_Refined_1
title