2025-07-29
ENA first public
ERC000033
ENA-CHECKLIST
One Health Pact Consortium (2020–2022), EcoAlert Collaborative Team (2016–2019)
INSDC center name
public
INSDC status
ERS24612631
SRA accession
USUV_GridION_run733_bc11
Submitter Id
ERASMUS MC, UNIVERISTY MEDICAL CENTER
broker name
One Health Pact Consortium (2020–2022), EcoAlert Collaborative Team (2016–2019)
collecting institution
2022-08-24
collection date
One Health Pact Consortium (2020–2022), EcoAlert Collaborative Team (2016–2019)
collector name
Usutu virus
common name
Samples from free-ranging birds testing RT-PCR positive for Usutu virus (CT values below 32) were subjected to whole-genome sequencing using an amplicon-based Oxford Nanopore approach.
description
Netherlands
geographic location (country and/or sea)
52.09551
DD
geographic location (latitude)
5.01253
DD
geographic location (longitude)
Utrecht, Vleuten Panbos
geographic location (region and locality)
Eurasian Blue Tit
host common name
recovered
host disease outcome
not provided
host health state
Cyanistes caeruleus
host scientific name
not provided
host sex
22TV2594
host subject id
USUV/NL/2022/22TV2594
isolate
throat cloacal swab
isolation source host-associated
Usutu virus
organism
Münger et al. (preprint, 2024) Emergence and Dynamics of Usutu and West Nile Viruses in the Netherlands, 2016-2022
publication
active surveillance not initiated by an outbreak
sample capture status
Usutu virus
scientific_name
Host-derived Usutu virus, live free-ranging bird, the Netherlands
title