2025-07-30
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25336078
SRA accession
SRR30567663_binner12_Refined_5
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2022-07-20
collection date
68.51
%
completeness score
CheckM2_v1.0.1
completeness software
2.29
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR30567663 of study SRP530953.
description
maize
environmental medium
China
geographic location (country and/or sea)
37.74000000
DD
geographic location (latitude)
113.26000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Rhizobacter sp.
organism
36 soil microbial samples were collected from maize rhizosphere at jointing stage, maturity stage and harvest stage after plastic film mulching and nitrogen fertilizer application
project name
SAMN43427125
sample derived from
uncultured Rhizobacter sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR30567663_binner12_Refined_5
title