2025-07-29
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25334325
SRA accession
SRR12964292_binner23_Refined_1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2020-04
collection date
80.06
%
completeness score
CheckM2_v1.0.1
completeness software
0.78
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12964292 of study SRP290783.
description
maize
environmental medium
South Africa
geographic location (country and/or sea)
-25.59000000
DD
geographic location (latitude)
26.31000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Sphingomonas sp.
organism
To access the Functional diversity of the Microbial community of maize rhizosphere using metagenomic approach
project name
SAMN16623459
sample derived from
uncultured Sphingomonas sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR12964292_binner23_Refined_1
title