2025-07-30
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25336454
SRA accession
SRR32277392_concoct_74
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2023-10-11
collection date
59.37
%
completeness score
CheckM2_v1.0.1
completeness software
2.64
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR32277392 of study SRP562358.
description
tomato
environmental medium
China
geographic location (country and/or sea)
31.63000000
DD
geographic location (latitude)
119.17000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Anaerolineales bacterium
organism
we conducted a greenhouse experiment with four treatments: no fertilizer (CK), chemical fertilizer (CF), single application of organic amendments (OA), and partially replacing chemical fertilizers with organic amendments (OA-CF), aiming to explore the regulatory mechanism of organic amendments addition to ecosystem multifunctionality.
project name
SAMN46734762
sample derived from
uncultured Anaerolineales bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR32277392_concoct_74
title