2025-07-30
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25336298
SRA accession
SRR28857636_concoct_20
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2023-02-03
collection date
70.83
%
completeness score
CheckM2_v1.0.1
completeness software
1.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR28857636 of study SRP505091.
description
maize
environmental medium
Thailand
geographic location (country and/or sea)
14.65000000
DD
geographic location (latitude)
101.31000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
Enterobacter cloacae
organism
A BioProject provides the raw reads of shotgun metagenomic sequencing of phyllosphere and rhizosphere of commercial sweet corn in Thailand.
project name
SAMN41090550
sample derived from
Enterobacter cloacae
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR28857636_concoct_20
title