2025-08-01
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25354061
SRA accession
SRR3960572_bin_2706
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.11.1
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
marine biome
broad-scale environmental context
EBI-EMG
broker name
2011-07-09
collection date
72.58
%
completeness score
CheckM2_v1.0.1
completeness software
4.04
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3960572 of study SRP080008.
description
sea water
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
32.08000000
DD
geographic location (latitude)
-17.26000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
deep sea
local environmental context
marine metagenome
metagenomic source
uncultured Nitrospina sp.
organism
Marine microbial communities from the Deep Atlantic Ocean - MP2968 metagenome
project name
SAMN05422168
sample derived from
uncultured Nitrospina sp.
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR3960572_bin_2706
title