infernal v1.1.5, Rfam 15.0
16S recovery software
No
16s recovered
2025-08-01
ENA first public
ERC000011
ENA-CHECKLIST
Uni Bremen
INSDC center name
public
INSDC status
bowtie2 v2.5.4
MAG coverage software
ERS25319492
SRA accession
Co_bin_130_strict
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics.
assembly quality
megahit v1.2.9, SPAdes v4.0.0
assembly software
differential coverage, tetranucleotide frequency
binning parameters
concoct v1.1.0, metabat2 v2.17
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
missing: sample group
collection date
90.71
%
completeness score
checkm2 v1.1.0
completeness software
1.58
%
contamination score
MAG retrieved from co-assembly of all metagenomic samples of the bioproject PRJEB90443.
description
saline water [ENVO:00002010]
environmental medium
missing: sample group
geographic location (country and/or sea)
missing: sample group
DD
geographic location (latitude)
missing: sample group
DD
geographic location (longitude)
marine water
isolation_source
sea water environment [ENVO:01000321]
local environmental context
marine plankton metagenome
metagenomic source
29
number of standard tRNAs extracted
Candidatus Azotimanducaceae bacterium
organism
Investigation of environmental disturbances on microbial communities in coastal environments
project name
Yes
reassembly post binning
ERR15116726,ERR15116725,ERR15116724,ERR15116723,ERR15116722,ERR15116721,ERR15116720,ERR15116719,ERR15116718,ERR15116717,ERR15116716,ERR15116715,ERR15116714,ERR15116713,ERR15116712,ERR15116711,ERR15116710,ERR15116709,ERR15116708,ERR15116707,ERR15116706,ERR15116705,ERR15116704,ERR15116703,ERR15116702,ERR15116701,ERR15116700,ERR15116699,ERR15116698,ERR15116697,ERR15116696,ERR15116695,ERR15116694,ERR15116693,ERR15116692,ERR15116691,ERR15116690,ERR15116689,ERR15116688,ERR15116687,ERR15116686,ERR15116685,ERR15116684,ERR15116683,ERR15116682,ERR15116681,ERR15116680,ERR15116679,ERR15116882,ERR15116881,ERR15116880,ERR15116879,ERR15116878,ERR15116877,ERR15116876,ERR15116875,ERR15116874,ERR15116873,ERR15116872,ERR15116871,ERR15116870,ERR15116869,ERR15116868,ERR15116867,ERR15116866,ERR15116865,ERR15116864,ERR15116863,ERR15116862,ERR15116861,ERR15116860,ERR15116859,ERR15116858,ERR15116857,ERR15116856,ERR15116855,ERR15116854,ERR15116853,ERR15116852,ERR15116851,ERR15116850,ERR15116849,ERR15116848,ERR15116847,ERR15116846,ERR15116845,ERR15116844,ERR15116843,ERR15116678,ERR15116677,ERR15116676,ERR15116675,ERR15116674,ERR15116673,ERR15116672,ERR15116671,ERR15116670,ERR15116669,ERR15116668,ERR15116667,ERR15116666,ERR15116665,ERR15116664,ERR15116663,ERR15116662,ERR15116661,ERR15116660,ERR15116659,ERR15116658,ERR15116657,ERR15116656,ERR15116655,ERR15116654,ERR15116653,ERR15116652,ERR15116651,ERR15116650,ERR15116649,ERR15116648,ERR15116647,ERR15116646,ERR15116645
sample derived from
Candidatus Azotimanducaceae bacterium
scientific_name
tRNAscan-SE 2.0
tRNA extraction software
gtdbtk v2.4.1, Genome Taxonomy Database R226
taxonomic classification
multi-marker approach
taxonomic identity marker
MAG from Co-assembly
title