2025-08-05
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25370024
SRA accession
SRR25996634_metabat2_4
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2021-08-23
collection date
75.13
%
completeness score
CheckM2_v1.0.1
completeness software
3.51
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR25996634 of study SRP459440.
description
maize
environmental medium
China
geographic location (country and/or sea)
47.27000000
DD
geographic location (latitude)
126.41000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Gemmatimonadaceae bacterium
organism
We studied microbial communities in maize root compartments (bulk soil, rhizosphere soil, root endophyte) from an experiment with fertilization (control chemical fertilizer chemical fertilizer and straw amendments) and cropping (continuous and rotational cropping) treatments in Northeast China.
project name
SAMN37343955
sample derived from
uncultured Gemmatimonadaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR25996634_metabat2_4
title