2025-08-05
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25370010
SRA accession
SRR25996617_metabat2_13
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2021-08-23
collection date
89.9
%
completeness score
CheckM2_v1.0.1
completeness software
1.16
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR25996617 of study SRP459440.
description
maize
environmental medium
China
geographic location (country and/or sea)
47.27000000
DD
geographic location (latitude)
126.41000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
Klebsiella grimontii
organism
We studied microbial communities in maize root compartments (bulk soil, rhizosphere soil, root endophyte) from an experiment with fertilization (control chemical fertilizer chemical fertilizer and straw amendments) and cropping (continuous and rotational cropping) treatments in Northeast China.
project name
SAMN37343970
sample derived from
Klebsiella grimontii
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR25996617_metabat2_13
title