2025-08-07
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25402451
SRA accession
SRR16095335_concoct_21
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2020-07-19
collection date
77.58
%
completeness score
CheckM2_v1.0.1
completeness software
0.17
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR16095335 of study SRP339051.
description
maize
environmental medium
not provided
geographic location (country and/or sea)
40.08000000
DD
geographic location (latitude)
116.13000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured bacterium
organism
Understanding microbial functional response to bulk soil and rhizosphere
project name
SAMN20157249
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR16095335_concoct_21
title