2025-08-14
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25494537
SRA accession
SRR27822708_metabat2_33
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2023-10
collection date
80.16
%
completeness score
CheckM2_v1.0.1
completeness software
3.9
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR27822708 of study SRP433982.
description
maize
environmental medium
China
geographic location (country and/or sea)
28.35000000
DD
geographic location (latitude)
116.18000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured Phenylobacterium sp.
organism
Beneficial interactions between rhizosphere microbes and soil are pivotal for crop fitness. Nevertheless, the principles underlying the assembly of rhizosphere microbiomes across various soils and nutrient status remain elusive. Here, we examined the microbiomes in the rhizosphere and bulk soils of maize grown under three soil types with fertilization for at least 29 years. We conclude that maize selects rhizobacteria based on microbial functional traits beneficial to its own performance not solely on species composition.
project name
SAMN39711930
sample derived from
uncultured Phenylobacterium sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR27822708_metabat2_33
title