2025-08-15
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS25578486
SRA accession
SRR11839389_maxbin2_10
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.2.0
binning software
soil
broad-scale environmental context
EBI-EMG
broker name
2019
collection date
99.81
%
completeness score
CheckM2_v1.0.1
completeness software
0.06
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR11839389 of study SRP263360.
description
maize
environmental medium
Germany
geographic location (country and/or sea)
50.96000000
DD
geographic location (latitude)
6.86000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
rhizosphere metagenome
isolation_source
rhizosphere
local environmental context
rhizosphere metagenome
metagenomic source
uncultured bacterium
organism
RNA-sequencing and metagenomic sequencing (16S, ITS and shotgun metagenome analyses) data of maize genotypes and mutants along root developmental zones in the field.
project name
SAMN14645698
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR11839389_maxbin2_10
title