2025-08-16
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA114268974
External Id
UNIVERSITY OF BRITISH COLUMBIA
INSDC center name
2023-08-16T07:52:46Z
INSDC last update
public
INSDC status
ERS16258030
SRA accession
ena-SAMPLE-TAB-16-08-2023-07:52:45:493-39204
Submitter Id
2021-04-24
collection date
Castlemart
cultivar
17
days of infestation
tomato leaf microbiome Castlemart jai1 genotype
description
plant-associated environment ENVO_01001001
env_broad_scale
cultivated environment ENVO_01000311
env_local_scale
leaf PO:0025034
env_medium
jai1
genotype
Canada
geographic location (country and/or sea)
Solanum lycopersicum
host
tomato
host_common_name
Amplicon 16S rRNA
investigation_type
43.7844 N 79.1851 W
lat_lon
PCR
nucl_acid_amp
Qiagen MagAttract PowerSoil DNA KF
nucl_acid_ext
plant metagenome
organism
515F:GTGCCAGCMGCCGCGGTAA 806R:GGACTACHVGGGTWTCTAAT
pcr_primers
EGV_59
sample_name
plant metagenome
scientific_name
Illumina MiSeq
seq_methods
16S rRNA
target_gene
tomato leaf
title