2025-08-18
ENA first public
ERC000015
ENA-CHECKLIST
SAMEA114291248
External Id
Malopolska Centre of Biotechnology
INSDC center name
2023-08-18T13:40:33Z
INSDC last update
public
INSDC status
ERS16280365
SRA accession
deep614
Submitter Id
not provided
alcohol consumption frequency
no
allergy
no
antibiotic treatment during hospitalization
no
antibiotics before hospital
material anatomical entity
broad-scale environmental context
2020-12-28
collection date
yes
death
Human gut metagenome sample
description
yes
diabetes
type II diabetes
diabetes type
feces
environmental medium
White
ethnicity
Poland
geographic location (country and/or sea)
52.24
DD
geographic location (latitude)
21.02
DD
geographic location (longitude)
CSK
hospital
stool
host body product
intestine
host body site
37.6
kg/m2
host body-mass index
167
cm
host height
female
host sex
145
host subject id
yes
hypertension
yes
icu
organism substance
local environmental context
not provided
location of the tumour
not provided
medications dose
Polish
nationality
human gut metagenome
organism
yes
other medical conditions
yes
other medications
Gut Microbiome Dynamics and Predictive Value in Hospitalized COVID-19 Patients: A Comparative Analysis of Shallow and Deep Shotgun Sequencing
project name
0.1
%
sample human DNA contamination
-20
°C
sample storage temperature
human gut metagenome
scientific_name
not provided
seasonal allergy
Illumina NovaSeq 6000
sequencing method
no
smoker
never
smoking frequency
patient (case)
subject type
145_28122020
title
not provided
tumour