MUSIC_OP_243
2025-08-27
ENA first public
ERC000014
ENA-CHECKLIST
Respiratory Research Group, University of Dundee
INSDC center name
public
INSDC status
ERS23194569
SRA accession
MUSIC_OP_243
Submitter Id
F- 5� TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG; R- 5� GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG
adapters
Human-associated
broad-scale environmental context
2019
collection date
Human oropharyngeal microbiome obtained from patient with COPD
description
Oropharynx
environmental medium
United Kingdom
geographic location (country and/or sea)
not collected
DD
geographic location (latitude)
not collected
DD
geographic location (longitude)
Upper airway
local environmental context
Nuclease free water, QEB
negative control type
https://support.illumina.com/documents/documentation/chemistry_documentation/16s/16s-metagenomic-library-prep-guide-15044223-b.pdf
nucleic acid amplification
https://www.qiagen.com/gb/products/discovery-and-translational-research/dna-rna-purification/dna-purification/microbial-dna/dneasy-powersoil-pro-kit
nucleic acid extraction
human oral metagenome
organism
F- 5' CCTACGGGNGGCWGCAG; R- 5' GACTACHVGGGTATCTAATCC
pcr primers
ZymoBIOMICS Microbial Community DNA Standard
positive control type
Microbiome Use to Stratify use of Inhaled Corticosteroids (MUSIC)Trial
project name
human oral metagenome
scientific_name
Human oropharyngeal swab microbiome
title