2025-09-13
ENA first public
ERC000047
ENA-CHECKLIST
UFZ
INSDC center name
public
INSDC status
ERS26824480
SRA accession
CTOTU9965
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
SPAdes
assembly software
Default metaWRAP parameters
binning parameters
metaWRAP
binning software
missing
broad-scale environmental context
2014-02-03
collection date
98.20
%
completeness score
CheckM
completeness software
0.08
%
contamination score
missing
environmental medium
Spain
geographic location (country and/or sea)
38.535003
DD
geographic location (latitude)
-0.26653099
DD
geographic location (longitude)
freshwater
isolation_source
missing
local environmental context
freshwater metagenome
metagenomic source
Shigella flexneri
organism
Freshwater Reservoir Amadorio Metagenome
project name
SRS1496279
sample derived from
Shigella flexneri
scientific_name
Single-copy marker gene set
taxonomic identity marker
This sample represents a MAG derived from the metagenomic sample SRS1496279
title