2025-09-16
ENA first public
ERC000047
ENA-CHECKLIST
UFZ
INSDC center name
public
INSDC status
ERS26874854
SRA accession
CTOTU48588
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
SPAdes
assembly software
Default metaWRAP parameters
binning parameters
metaWRAP
binning software
city
broad-scale environmental context
2013-07-26
collection date
97.75
%
completeness score
CheckM
completeness software
1.79
%
contamination score
plastic
environmental medium
USA
geographic location (country and/or sea)
40.87
DD
geographic location (latitude)
-73.91
DD
geographic location (longitude)
missing
isolation_source
subway
local environmental context
terrestrial metagenome
metagenomic source
Stenotrophomonas pavanii
organism
New York City MTA subway samples Metagenome
project name
SRS802365
sample derived from
Stenotrophomonas pavanii
scientific_name
Single-copy marker gene set
taxonomic identity marker
This sample represents a MAG derived from the metagenomic sample SRS802365
title