2025-09-16
ENA first public
ERC000011
ENA-CHECKLIST
Gyeongsang National University Animal Genomics Laboratory
INSDC center name
public
INSDC status
ERS26867393
SRA accession
E-MTAB-15592:Oral6T_pre
Submitter Id
13
year
age
ArrayExpress
broker name
not collected
collection date
dog
common name
Protocols: Tumor tissue was obtained by Tru-cut biopsy and preserved in RNAlater™ before RT. Peripheral blood was drawn from the external jugular vein into Tempus™ Blood RNA Tubes at two time points: before RT (Pre-RT) and immediately after the final radiation fraction (Post-RT 0m). Samples were stored at −80 °C until processing. Animal procedures were approved by the IACUC (GNU-240826-D0172). Genomic DNA was extracted from Pre-RT Tumor, Pre-RT Blood, and Post-RT 0 m Blood by the service provider following internal standard operating procedures. PCR-free whole-genome libraries were prepared using the TruSeq PCR-free Sample Preparation Kit (Illumina). Library QC was performed with KAPA Library Quantification and Agilent High Sensitivity DNA chip.
description
adult
developmental stage
Oral melanoma
disease
wild type genotype
genotype
not collected
geographic location (country and/or sea)
not applicable
isolate
Canis lupus familiaris
organism
Canis lupus familiaris
organism
Tumor
organism part
Tumor tissue
sample type
Canis lupus familiaris
scientific_name
Neutered male
sex
mixed-breed
strain
Pre-RT
time point
Oral6T_pre
title