2025-09-16
ENA first public
ERC000047
ENA-CHECKLIST
UFZ
INSDC center name
public
INSDC status
ERS26877245
SRA accession
CTOTU50712
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
SPAdes
assembly software
Default metaWRAP parameters
binning parameters
metaWRAP
binning software
missing
broad-scale environmental context
2013-12-17
collection date
98.25
%
completeness score
CheckM
completeness software
2.47
%
contamination score
missing
environmental medium
India
geographic location (country and/or sea)
20.459293
DD
geographic location (latitude)
85.93301
DD
geographic location (longitude)
rice field; ambient CO2
isolation_source
missing
local environmental context
soil metagenome
metagenomic source
Lactiplantibacillus plantarum
organism
Metagenome study of rice samples under various conditions
project name
SRS811899
sample derived from
Lactiplantibacillus plantarum
scientific_name
Single-copy marker gene set
taxonomic identity marker
This sample represents a MAG derived from the metagenomic sample SRS811899
title