2025-09-18
ENA first public
ERC000013
ENA-CHECKLIST
IOW Leibniz-Institut fur Ostseeforschung Warnemuende
INSDC center name
public
INSDC status
ERS26774042
SRA accession
223204:11adab19-75e0-4267-bb26-20956617ffd7
Submitter Id
temperate marginal sea biome [ENVO:01000856]
broad-scale environmental context
GFBIO
broker name
2021-08-10
collection date
1
m
depth
Mytilus microbiome from station BV28-A replicate c
description
shallow marine sediment [ENVO:03000034]
environmental medium
host associated
environmental package
yes
environmental_sample
Estonia
geographic location (country and/or sea)
55.49
DD
geographic location (latitude)
21.24
DD
geographic location (longitude)
Baltic Sea coastal samples
geographic location (region and locality)
host associated
host associated environmental package
mimarks-survey
investigation type
microbial community [PCO:1000004]
local environmental context
Samples were thawed and homogenized. A subsample of 4-6 leaves was transferred into bead-beating tube. This was placed on ice and sonicated twice for 7 min and bead beaten for 30 s at 4 m/s. DNA was extracted with PowerSoil DNA isolation - DNeasy PowerSoil Pro Kit
nucleic acid extraction
gut metagenome
organism
FWD:CCAGCASCYGCGGTAATTCC REV:ACTTTCGTTCTTGATYRR
pcr primers
BaltVib
project name
Stored at -80 C
sample material processing
Mytilus microbiome from station BV28-A replicate c
sample_description
gut metagenome
scientific_name
Illumina NovaSeq 6000
sequencing method
true
submitted to insdc
V4
target subfragment
M10
title