No
16S recovered
Infernal: 1.1.5
16S recovery software
2025-09-23
ENA first public
ERC000047
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.29-r1283; coverm: 0.7.0
MAG coverage software
ERS26910669
SRA accession
ef8efb39-7aeb-4829-aabe-2254bf3e1d94
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
metabat2: 2.17; dastool: 1.1.7; maxbin2: 2.2.7; metator: 1.3.10; bin3c: 0.3.3
binning software
aquatic biome
broad-scale environmental context
2024-02-29
collection date
86.17
%
completeness score
checkm2: 1.1.0
completeness software
1.52
%
contamination score
14.3
m
depth
adult sponge tissue
environmental medium
USA
geographic location (country and/or sea)
26.16
DD
geographic location (latitude)
-80.08
DD
geographic location (longitude)
Florida | Fort Lauderdale | BC2
geographic location (region and locality)
Amphimedon compressa
host scientific name
178514
host taxid
metagenome-assembled genome
investigation type
Sponge: Amphimedon compressa
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
20
number of standard tRNAs extracted
Planctomycetaceae bacterium
organism
ASG
project name
SAMEA120249617
sample derived from
Planctomycetaceae bacterium
scientific_name
Illumina NovaSeqX; Illumina NovaSeqX; PacBio Revio; Illumina NovaSeqX
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
ani_screen
taxonomic identity marker
ef8efb39-7aeb-4829-aabe-2254bf3e1d94-asg-odAmpComp2_metamdbg_dastool_6
title
odAmpComp2.Planctomycetaceae_1
tolid