ERC000047
ENA-CHECKLIST
0.1
GUNC clade separation score
0.09
GUNC contamination score
0.44
GUNC reference representation score
GUNC v1.0.6
GUNC version
EMBL Heidelberg
INSDC center name
bwa mem
MAG coverage software
https://spire.embl.de/spire/v1/cluster/spire_v1_095_000327558
SPIRE genome cluster
https://spire.embl.de/spire/v1/genome/spire_mag_00738320
SPIRE genome id
ERS25639386
SRA accession
spire_mag_00738320
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
megahit 1.2.9
assembly software
tetramer and coverage
binning parameters
metaBAT2 v2.12.1
binning software
missing: third party data
broad-scale environmental context
missing: third party data
collection date
97.87
%
completeness score
CheckM2 v0.1.3
completeness software
0.00
%
contamination score
85887
contig N50
ERZ27268712
derived from assembly
missing: third party data
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
missing: third party data
isolation_source
https://spire.embl.de/spire/v1/sample/57185
linked to SPIRE sample
https://spire.embl.de/spire/v1/study/377
linked to SPIRE study
ERP174905
linked to analysis project
missing: third party data
local environmental context
metagenomes
metagenomic source
36
number of contigs
Gammaproteobacteria bacterium
organism
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
project name
SAMN06052522
sample derived from
Gammaproteobacteria bacterium
scientific_name
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Berkiellales;f__Berkiellaceae;g__CADEEZ01;s__
taxonomic classification
GTDBtk v2.3.2_r214
taxonomic classification software
multi-marker approach
taxonomic identity marker
Metagenome-Assembled Genome spire_mag_00738320 in SPIRE v01 classified as CADEEZ01
title