2025-10-08
ENA first public
ERC000047
ENA-CHECKLIST
Computational Biology and Microbial Ecology
INSDC center name
public
INSDC status
ERS20881795
SRA accession
Dyanayuyu.002
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
megahit;min contig lenght 1000bp
assembly software
min contig lenght:1000 for the assembler. Default parameters for all binning tools and refining tools.
binning parameters
CONCOT(1.1.0),MaxBin2(2.2.7),MetaBAT2(2.15),DASTool(1.1.2)
binning software
ENVO_01001371
broad-scale environmental context
2019-01
collection date
98.19
%
completeness score
checkm
completeness software
1.43
%
contamination score
Metagenome assembled genome from Neotropical Drosophila species
description
FOODON_00001069
environmental medium
Ecuador
geographic location (country and/or sea)
-0.021698
DD
geographic location (latitude)
-78.523639
DD
geographic location (longitude)
The flies were kept in a banana culture medium(Rafael & Arcos, 1988) under controlled conditions with a 17 �C temperature and a 12-hour photoperiod. For the extraction of DNA, 5 females and 5 males of each species were used and the DNA was extracted with the method described by Pi�ol et al. 1988 (Pi�ol et al., 1988).
isolation_source
OBI:0000142
local environmental context
insect metagenome
metagenomic source
Enterococcus sp.
organism
PRJEB70495
project name
ERS17206768
sample derived from
Enterococcus sp.
scientific_name
multi-marker approach
taxonomic identity marker
Dyanayuyu.002
title