2025-10-09
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS26976511
SRA accession
SRR25411508_concoct_18
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
missing: third party data
collection date
99.7
%
completeness score
CheckM2_v1.0.1
completeness software
0.08
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR25411508 of study SRP451263.
description
oral sample
environmental medium
USA
geographic location (country and/or sea)
39.43933024
DD
geographic location (latitude)
-76.56882640
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human oral metagenome
isolation_source
oral cavity
local environmental context
human oral metagenome
metagenomic source
Fusobacterium periodonticum
organism
A Longitudinal Metagenomic Comparative Analysis of Oral Microbiome Shifts in Patients Receiving Proton Radiation Versus Photon Radiation for Head and Neck Cancer
project name
SAMN36678106
sample derived from
Fusobacterium periodonticum
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR25411508_concoct_18
title