2025-10-09
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS26976528
SRA accession
SRR25411502_concoct_9
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
missing: third party data
collection date
92.63
%
completeness score
CheckM2_v1.0.1
completeness software
2.62
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR25411502 of study SRP451263.
description
oral sample
environmental medium
USA
geographic location (country and/or sea)
39.43933024
DD
geographic location (latitude)
-76.56882640
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human oral metagenome
isolation_source
oral cavity
local environmental context
human oral metagenome
metagenomic source
uncultured Lachnoanaerobaculum sp.
organism
A Longitudinal Metagenomic Comparative Analysis of Oral Microbiome Shifts in Patients Receiving Proton Radiation Versus Photon Radiation for Head and Neck Cancer
project name
SAMN36678112
sample derived from
uncultured Lachnoanaerobaculum sp.
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR25411502_concoct_9
title