2025-10-09
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS26974847
SRA accession
SRR29249436_metabat2_4
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.2.0
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
2022
collection date
99.28
%
completeness score
CheckM2_v1.0.1
completeness software
3.42
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR29249436 of study SRP511060.
description
saliva
environmental medium
China
geographic location (country and/or sea)
39.54000000
DD
geographic location (latitude)
116.23000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human oral metagenome
isolation_source
oral cavity
local environmental context
human oral metagenome
metagenomic source
uncultured Propionibacteriaceae bacterium
organism
Oral microbiome structure and functional pathways of patiens with craniofacial microsomia.
project name
SAMN41600451
sample derived from
uncultured Propionibacteriaceae bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR29249436_metabat2_4
title