2025-10-10
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS26983906
SRA accession
SRR31548267_metabat2_2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.2.0
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
2020/2021
collection date
55.49
%
completeness score
CheckM2_v1.0.1
completeness software
4.97
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR31548267 of study SRP548312.
description
oral sample
environmental medium
Australia
geographic location (country and/or sea)
missing: third party data
DD
geographic location (latitude)
missing: third party data
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human oral metagenome
isolation_source
oral cavity
local environmental context
human oral metagenome
metagenomic source
uncultured Veillonella sp.
organism
Buccal swab and rinse samples from pregnant women with and without T2DM. Human DNA has been removed from raw sequence reads (paired-end 150bp).
project name
SAMN44730233
sample derived from
uncultured Veillonella sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR31548267_metabat2_2
title