2025-10-11
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS26985645
SRA accession
SRR31188358_binner123_Refined_21
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.2.0
binning software
human digestive system
broad-scale environmental context
EBI-EMG
broker name
2017/2022
collection date
89.72
%
completeness score
CheckM2_v1.0.1
completeness software
1.23
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR31188358 of study SRP541447.
description
oral sample
environmental medium
USA
geographic location (country and/or sea)
29.69000000
DD
geographic location (latitude)
-95.39000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human oral metagenome
isolation_source
oral cavity
local environmental context
human oral metagenome
metagenomic source
Campylobacter rectus
organism
This project studies the diversity and characteristics of the oral microbiome influenced by race and ethnicity.
project name
SAMN43928017
sample derived from
Campylobacter rectus
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR31188358_binner123_Refined_21
title