2025-10-30
ENA first public
ERC000049
ENA-CHECKLIST
INRAE
INSDC center name
public
INSDC status
ERS20401708
SRA accession
MetSSV1
Submitter Id
Single, validated, contiguous sequence per replicon without gaps or ambiguities, with extensive manual review and editing to annotate putative gene functions and transcriptional units
UViG assembly quality
MEGAHIT v1.2.9
assembly software
anaerobic digestion batch mesophilic microcosm
broad-scale environmental context
2021
collection date
MetSSV1 is predicted to infect mesophilic Methanosarcina archaea. The genome was obtained through the co-assembly of all metaviromes from project PRJEB67801. They were prepared from anaerobic digestion batch microcosms fed with biowaste and operated in mesophilic conditions (35°C). The microcosms were either undisturbed, or disturbed with one compound among phenol, sodium chloride, ammonium chloride or mytomycin C.
description
independent sequence (UViG)
detection type
BMP buffer
environmental medium
France
geographic location (country and/or sea)
48.74967
DD
geographic location (latitude)
2.317881
DD
geographic location (longitude)
Anaerobic digestion batch microcosms fed with biowaste and operated in mesophilic conditions (35°C). The microcosms were either undisturbed, or disturbed with one compound among phenol, sodium chloride, ammonium chloride or mytomycin C.
isolation_source
viral particles collected from the liquid phase (supernatant)
local environmental context
anaerobic digester metagenome
metagenomic source
uncultured archaeal virus
organism
non-segmented
predicted genome structure
dsDNA
predicted genome type
Virus and host dynamics during AD inhibition
project name
ERS16515442
sample derived from
uncultured archaeal virus
scientific_name
viral fraction metagenome (virome)
source of UViGs
Methanosarcina spindle-shaped virus 1, uncultured virus, complete genome (MetSSV1)
title
VIBRANT
viral identification software
centrifugation
virus enrichment approach